Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Gm30285-201ENSMUST00000214614 422 ntBASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lins1Q3U1D0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.29■□□□□ 0.04
Lins1Q3U1D0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.29■□□□□ 0.04
Lins1Q3U1D0 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lins1Q3U1D0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Gm26461-201ENSMUST00000175064 290 ntBASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Mir7221-201ENSMUST00000184009 72 ntBASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lins1Q3U1D0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Gm2383-201ENSMUST00000181461 807 ntBASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Gm26956-201ENSMUST00000182176 986 ntBASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.27■□□□□ 0.04
Lins1Q3U1D0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms