Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Xrn1P97789 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Xrn1P97789 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Xrn1P97789 Gm37131-201ENSMUST00000192502 1561 ntBASIC17.87■□□□□ 0.45
Xrn1P97789 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Xrn1P97789 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm11511-201ENSMUST00000118146 540 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Gm14247-201ENSMUST00000120950 237 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Gm4726-201ENSMUST00000135604 736 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Gm6019-201ENSMUST00000148369 736 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Gm18159-201ENSMUST00000174516 1070 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Gm12407-201ENSMUST00000180219 324 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Xrn1P97789 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm43186-201ENSMUST00000198130 824 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm7395-201ENSMUST00000216059 1045 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC17.86■□□□□ 0.45
Xrn1P97789 AC112945.1-201ENSMUST00000226413 514 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.86■□□□□ 0.45
Xrn1P97789 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm12856-201ENSMUST00000119471 1293 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm3671-201ENSMUST00000182463 1007 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm45575-201ENSMUST00000210283 548 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 CT009713.8-202ENSMUST00000224732 385 ntBASIC17.86■□□□□ 0.45
Xrn1P97789 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Xrn1P97789 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.86■□□□□ 0.45
Xrn1P97789 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC17.86■□□□□ 0.45
Xrn1P97789 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC17.86■□□□□ 0.45
Xrn1P97789 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Xrn1P97789 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC17.85■□□□□ 0.45
Xrn1P97789 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.85■□□□□ 0.45
Xrn1P97789 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Xrn1P97789 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 Gm11451-201ENSMUST00000118946 630 ntBASIC17.85■□□□□ 0.45
Xrn1P97789 Gm16397-201ENSMUST00000122201 494 ntBASIC17.85■□□□□ 0.45
Xrn1P97789 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC17.85■□□□□ 0.45
Xrn1P97789 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC17.85■□□□□ 0.45
Xrn1P97789 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC17.85■□□□□ 0.45
Xrn1P97789 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 Gm3765-201ENSMUST00000130985 1447 ntBASIC17.85■□□□□ 0.45
Xrn1P97789 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC17.85■□□□□ 0.45
Xrn1P97789 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Xrn1P97789 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.85■□□□□ 0.45
Xrn1P97789 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Xrn1P97789 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Xrn1P97789 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Xrn1P97789 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC17.84■□□□□ 0.45
Xrn1P97789 Gm23045-201ENSMUST00000175041 96 ntBASIC17.84■□□□□ 0.45
Xrn1P97789 Gm21092-201ENSMUST00000178995 955 ntBASIC17.84■□□□□ 0.45
Xrn1P97789 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Xrn1P97789 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Xrn1P97789 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Xrn1P97789 Gm37795-201ENSMUST00000194216 2459 ntBASIC17.84■□□□□ 0.45
Xrn1P97789 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Xrn1P97789 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms