Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
Trim43bP86448 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.27□□□□□ -0.29
Trim43bP86448 Gm38223-201ENSMUST00000194484 695 ntBASIC13.27□□□□□ -0.29
Trim43bP86448 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.27□□□□□ -0.29
Trim43bP86448 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.27□□□□□ -0.29
Trim43bP86448 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trim43bP86448 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trim43bP86448 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trim43bP86448 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.26□□□□□ -0.29
Trim43bP86448 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trim43bP86448 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Trim43bP86448 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Gm19931-201ENSMUST00000198920 368 ntBASIC13.26□□□□□ -0.29
Trim43bP86448 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.26□□□□□ -0.29
Trim43bP86448 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trim43bP86448 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.26□□□□□ -0.29
Trim43bP86448 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.26□□□□□ -0.29
Trim43bP86448 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trim43bP86448 Gm24447-201ENSMUST00000083977 338 ntBASIC13.26□□□□□ -0.29
Trim43bP86448 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Gm5356-201ENSMUST00000093326 615 ntBASIC13.26□□□□□ -0.29
Trim43bP86448 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trim43bP86448 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trim43bP86448 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Trim43bP86448 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.26□□□□□ -0.29
Trim43bP86448 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.25□□□□□ -0.29
Trim43bP86448 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim43bP86448 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trim43bP86448 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.25□□□□□ -0.29
Trim43bP86448 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trim43bP86448 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.25□□□□□ -0.29
Trim43bP86448 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trim43bP86448 Gm5161-201ENSMUST00000075243 853 ntBASIC13.25□□□□□ -0.29
Trim43bP86448 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.25□□□□□ -0.29
Trim43bP86448 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim43bP86448 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.25□□□□□ -0.29
Trim43bP86448 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.25□□□□□ -0.29
Trim43bP86448 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim43bP86448 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Trim43bP86448 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trim43bP86448 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trim43bP86448 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim43bP86448 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.24□□□□□ -0.29
Trim43bP86448 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms