Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SgcaP82350 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcaP82350 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.8□□□□□ -0.68
SgcaP82350 Gm12428-201ENSMUST00000119844 727 ntBASIC10.8□□□□□ -0.68
SgcaP82350 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcaP82350 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.8□□□□□ -0.68
SgcaP82350 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SgcaP82350 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SgcaP82350 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC10.8□□□□□ -0.68
SgcaP82350 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SgcaP82350 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SgcaP82350 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SgcaP82350 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SgcaP82350 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SgcaP82350 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.79□□□□□ -0.68
SgcaP82350 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.79□□□□□ -0.68
SgcaP82350 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Cog3-203ENSMUST00000227473 4197 ntBASIC10.79□□□□□ -0.68
SgcaP82350 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.79□□□□□ -0.68
SgcaP82350 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.79□□□□□ -0.68
SgcaP82350 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.79□□□□□ -0.68
SgcaP82350 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.79□□□□□ -0.68
SgcaP82350 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.79□□□□□ -0.68
SgcaP82350 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SgcaP82350 Gm10175-201ENSMUST00000086013 645 ntBASIC10.79□□□□□ -0.68
SgcaP82350 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SgcaP82350 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
SgcaP82350 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.79□□□□□ -0.68
SgcaP82350 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.79□□□□□ -0.68
SgcaP82350 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SgcaP82350 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SgcaP82350 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.79□□□□□ -0.68
SgcaP82350 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SgcaP82350 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SgcaP82350 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.78□□□□□ -0.68
SgcaP82350 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
SgcaP82350 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SgcaP82350 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Gm25287-201ENSMUST00000103846 110 ntBASIC10.78□□□□□ -0.68
SgcaP82350 Gm22918-201ENSMUST00000103855 110 ntBASIC10.78□□□□□ -0.68
SgcaP82350 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC10.78□□□□□ -0.68
SgcaP82350 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SgcaP82350 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms