Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.14□□□□□ -0.63
Atf1P81269 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.14□□□□□ -0.63
Atf1P81269 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Atf1P81269 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Atf1P81269 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.14□□□□□ -0.63
Atf1P81269 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Atf1P81269 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Atf1P81269 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.14□□□□□ -0.63
Atf1P81269 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Gm28911-201ENSMUST00000188837 117 ntBASIC11.14□□□□□ -0.63
Atf1P81269 Gm28693-202ENSMUST00000190758 331 ntBASIC11.14□□□□□ -0.63
Atf1P81269 Gm38671-201ENSMUST00000200573 130 ntBASIC11.14□□□□□ -0.63
Atf1P81269 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.14□□□□□ -0.63
Atf1P81269 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.14□□□□□ -0.63
Atf1P81269 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Atf1P81269 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atf1P81269 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Atf1P81269 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.13□□□□□ -0.63
Atf1P81269 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.13□□□□□ -0.63
Atf1P81269 Gm13813-201ENSMUST00000120998 787 ntBASIC11.13□□□□□ -0.63
Atf1P81269 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.13□□□□□ -0.63
Atf1P81269 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.13□□□□□ -0.63
Atf1P81269 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Atf1P81269 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.13□□□□□ -0.63
Atf1P81269 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atf1P81269 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.12□□□□□ -0.63
Atf1P81269 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Atf1P81269 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Atf1P81269 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.12□□□□□ -0.63
Atf1P81269 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.12□□□□□ -0.63
Atf1P81269 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Atf1P81269 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.12□□□□□ -0.63
Atf1P81269 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.12□□□□□ -0.63
Atf1P81269 Gm11618-201ENSMUST00000117946 267 ntBASIC11.12□□□□□ -0.63
Atf1P81269 Gm13612-201ENSMUST00000119276 390 ntBASIC11.12□□□□□ -0.63
Atf1P81269 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.12□□□□□ -0.63
Atf1P81269 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.12□□□□□ -0.63
Atf1P81269 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.12□□□□□ -0.63
Atf1P81269 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.12□□□□□ -0.63
Atf1P81269 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.12□□□□□ -0.63
Atf1P81269 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.12□□□□□ -0.63
Atf1P81269 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atf1P81269 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms