Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm11978-201ENSMUST00000122315 466 ntBASIC12.7□□□□□ -0.38
Shox2P70390 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.7□□□□□ -0.38
Shox2P70390 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Gm9727-201ENSMUST00000161387 555 ntBASIC12.7□□□□□ -0.38
Shox2P70390 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Shox2P70390 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.7□□□□□ -0.38
Shox2P70390 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.7□□□□□ -0.38
Shox2P70390 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.7□□□□□ -0.38
Shox2P70390 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.7□□□□□ -0.38
Shox2P70390 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shox2P70390 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Shox2P70390 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Shox2P70390 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Shox2P70390 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Mir686-201ENSMUST00000102174 109 ntBASIC12.69□□□□□ -0.38
Shox2P70390 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Gm6447-201ENSMUST00000118905 835 ntBASIC12.69□□□□□ -0.38
Shox2P70390 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Shox2P70390 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Gm18195-201ENSMUST00000207604 706 ntBASIC12.69□□□□□ -0.38
Shox2P70390 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Shox2P70390 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Shox2P70390 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Shox2P70390 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.69□□□□□ -0.38
Shox2P70390 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Shox2P70390 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shox2P70390 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Shox2P70390 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.68□□□□□ -0.38
Shox2P70390 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.68□□□□□ -0.38
Shox2P70390 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.68□□□□□ -0.38
Shox2P70390 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Shox2P70390 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Shox2P70390 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.68□□□□□ -0.38
Shox2P70390 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.68□□□□□ -0.38
Shox2P70390 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.68□□□□□ -0.38
Shox2P70390 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.68□□□□□ -0.38
Shox2P70390 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.68□□□□□ -0.38
Shox2P70390 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Shox2P70390 Shd-206ENSMUST00000225145 998 ntBASIC12.68□□□□□ -0.38
Shox2P70390 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Shox2P70390 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Shox2P70390 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.68□□□□□ -0.38
Shox2P70390 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Shox2P70390 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms