Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.76□□□□□ -0.37
Crnkl1P63154 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.76□□□□□ -0.37
Crnkl1P63154 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Crnkl1P63154 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.75□□□□□ -0.37
Crnkl1P63154 Gm44124-201ENSMUST00000204159 472 ntBASIC12.75□□□□□ -0.37
Crnkl1P63154 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Gm6916-202ENSMUST00000205523 195 ntBASIC12.75□□□□□ -0.37
Crnkl1P63154 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.75□□□□□ -0.37
Crnkl1P63154 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.75□□□□□ -0.37
Crnkl1P63154 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.75□□□□□ -0.37
Crnkl1P63154 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Crnkl1P63154 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.75□□□□□ -0.37
Crnkl1P63154 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Gm27321-201ENSMUST00000185021 205 ntBASIC12.74□□□□□ -0.37
Crnkl1P63154 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.74□□□□□ -0.37
Crnkl1P63154 Gm33320-201ENSMUST00000192232 530 ntBASIC12.74□□□□□ -0.37
Crnkl1P63154 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Crnkl1P63154 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.74□□□□□ -0.37
Crnkl1P63154 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Crnkl1P63154 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms