Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.82□□□□□ -0.68
Gabra1P62812 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC10.82□□□□□ -0.68
Gabra1P62812 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.82□□□□□ -0.68
Gabra1P62812 Gm25927-201ENSMUST00000175058 117 ntBASIC10.82□□□□□ -0.68
Gabra1P62812 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.82□□□□□ -0.68
Gabra1P62812 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.82□□□□□ -0.68
Gabra1P62812 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Gabra1P62812 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gabra1P62812 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Gabra1P62812 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gabra1P62812 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Gabra1P62812 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.81□□□□□ -0.68
Gabra1P62812 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.81□□□□□ -0.68
Gabra1P62812 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Gabra1P62812 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.81□□□□□ -0.68
Gabra1P62812 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Gabra1P62812 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm15393-201ENSMUST00000120499 219 ntBASIC10.81□□□□□ -0.68
Gabra1P62812 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm27390-201ENSMUST00000184516 176 ntBASIC10.81□□□□□ -0.68
Gabra1P62812 Gm27494-201ENSMUST00000184735 189 ntBASIC10.81□□□□□ -0.68
Gabra1P62812 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm9229-201ENSMUST00000222777 126 ntBASIC10.81□□□□□ -0.68
Gabra1P62812 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.81□□□□□ -0.68
Gabra1P62812 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Gabra1P62812 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.81□□□□□ -0.68
Gabra1P62812 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Gabra1P62812 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.81□□□□□ -0.68
Gabra1P62812 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Gabra1P62812 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Gabra1P62812 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.8□□□□□ -0.68
Gabra1P62812 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.8□□□□□ -0.68
Gabra1P62812 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Gabra1P62812 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Gabra1P62812 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms