Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.7□□□□□ -0.54
Lsm3P62311 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm3P62311 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lsm3P62311 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm3P62311 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.7□□□□□ -0.54
Lsm3P62311 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.7□□□□□ -0.54
Lsm3P62311 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.7□□□□□ -0.54
Lsm3P62311 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Lsm3P62311 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.7□□□□□ -0.54
Lsm3P62311 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.7□□□□□ -0.54
Lsm3P62311 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.7□□□□□ -0.54
Lsm3P62311 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.7□□□□□ -0.54
Lsm3P62311 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lsm3P62311 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.7□□□□□ -0.54
Lsm3P62311 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.7□□□□□ -0.54
Lsm3P62311 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm3P62311 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Lsm3P62311 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm3P62311 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Lsm3P62311 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm3P62311 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lsm3P62311 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Lsm3P62311 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm3P62311 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 Gm25948-201ENSMUST00000175334 112 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm3P62311 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Gm21470-201ENSMUST00000187680 696 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 Gm33320-201ENSMUST00000192232 530 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.69□□□□□ -0.54
Lsm3P62311 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.69□□□□□ -0.54
Lsm3P62311 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm3P62311 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Lsm3P62311 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm3P62311 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm3P62311 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm3P62311 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.68□□□□□ -0.54
Lsm3P62311 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms