Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm2P58774 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.82□□□□□ -0.04
Tpm2P58774 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm2P58774 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.82□□□□□ -0.04
Tpm2P58774 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Tpm2P58774 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm2P58774 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.82□□□□□ -0.04
Tpm2P58774 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Tpm2P58774 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm2P58774 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Tpm2P58774 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Tpm2P58774 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tpm2P58774 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.81□□□□□ -0.04
Tpm2P58774 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.81□□□□□ -0.04
Tpm2P58774 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.81□□□□□ -0.04
Tpm2P58774 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Tpm2P58774 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.81□□□□□ -0.04
Tpm2P58774 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Gm18905-201ENSMUST00000205454 928 ntBASIC14.81□□□□□ -0.04
Tpm2P58774 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Tpm2P58774 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Tpm2P58774 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC14.81□□□□□ -0.04
Tpm2P58774 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Tpm2P58774 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tpm2P58774 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.8□□□□□ -0.04
Tpm2P58774 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.8□□□□□ -0.04
Tpm2P58774 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm2P58774 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tpm2P58774 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm2P58774 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm2P58774 Gm14701-201ENSMUST00000117156 348 ntBASIC14.8□□□□□ -0.04
Tpm2P58774 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.8□□□□□ -0.04
Tpm2P58774 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm2P58774 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.8□□□□□ -0.04
Tpm2P58774 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tpm2P58774 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.8□□□□□ -0.04
Tpm2P58774 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm2P58774 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.8□□□□□ -0.04
Tpm2P58774 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm2P58774 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.8□□□□□ -0.04
Tpm2P58774 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tpm2P58774 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.8□□□□□ -0.04
Tpm2P58774 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tpm2P58774 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC14.79□□□□□ -0.04
Tpm2P58774 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.79□□□□□ -0.04
Tpm2P58774 Gm36957-201ENSMUST00000192982 2824 ntBASIC14.79□□□□□ -0.04
Tpm2P58774 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms