Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.88□□□□□ -0.35
Lim2P56563 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.88□□□□□ -0.35
Lim2P56563 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.88□□□□□ -0.35
Lim2P56563 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lim2P56563 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.88□□□□□ -0.35
Lim2P56563 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.88□□□□□ -0.35
Lim2P56563 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.88□□□□□ -0.35
Lim2P56563 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.88□□□□□ -0.35
Lim2P56563 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lim2P56563 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Lim2P56563 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.88□□□□□ -0.35
Lim2P56563 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lim2P56563 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.87□□□□□ -0.35
Lim2P56563 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.87□□□□□ -0.35
Lim2P56563 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lim2P56563 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.87□□□□□ -0.35
Lim2P56563 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.87□□□□□ -0.35
Lim2P56563 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.87□□□□□ -0.35
Lim2P56563 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.87□□□□□ -0.35
Lim2P56563 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.87□□□□□ -0.35
Lim2P56563 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Lim2P56563 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.87□□□□□ -0.35
Lim2P56563 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lim2P56563 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lim2P56563 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.87□□□□□ -0.35
Lim2P56563 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.87□□□□□ -0.35
Lim2P56563 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lim2P56563 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lim2P56563 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Lim2P56563 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.86□□□□□ -0.35
Lim2P56563 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lim2P56563 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.86□□□□□ -0.35
Lim2P56563 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.86□□□□□ -0.35
Lim2P56563 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lim2P56563 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lim2P56563 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.86□□□□□ -0.35
Lim2P56563 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Gm27514-201ENSMUST00000183692 110 ntBASIC12.86□□□□□ -0.35
Lim2P56563 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Gm5370-201ENSMUST00000187187 574 ntBASIC12.86□□□□□ -0.35
Lim2P56563 Gm37042-201ENSMUST00000193816 581 ntBASIC12.86□□□□□ -0.35
Lim2P56563 Gm19163-201ENSMUST00000223313 780 ntBASIC12.86□□□□□ -0.35
Lim2P56563 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Lim2P56563 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lim2P56563 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.86□□□□□ -0.35
Lim2P56563 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lim2P56563 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms