Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdh11P55288 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Cdh11P55288 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh11P55288 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.76□□□□□ -0.53
Cdh11P55288 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdh11P55288 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.76□□□□□ -0.53
Cdh11P55288 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdh11P55288 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cdh11P55288 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.75□□□□□ -0.53
Cdh11P55288 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Gm15429-201ENSMUST00000151268 798 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.75□□□□□ -0.53
Cdh11P55288 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 Gm18062-201ENSMUST00000208020 547 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Gm18055-201ENSMUST00000208254 547 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 Gm5035-201ENSMUST00000215581 927 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.75□□□□□ -0.53
Cdh11P55288 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.75□□□□□ -0.53
Cdh11P55288 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cdh11P55288 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.74□□□□□ -0.53
Cdh11P55288 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Cdh11P55288 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdh11P55288 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdh11P55288 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Gm6266-201ENSMUST00000203844 806 ntBASIC11.74□□□□□ -0.53
Cdh11P55288 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.74□□□□□ -0.53
Cdh11P55288 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 Gm17794-201ENSMUST00000220252 955 ntBASIC11.74□□□□□ -0.53
Cdh11P55288 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.74□□□□□ -0.53
Cdh11P55288 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.74□□□□□ -0.53
Cdh11P55288 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cdh11P55288 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms