Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox1P53783 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Gm11451-201ENSMUST00000118946 630 ntBASIC13.11□□□□□ -0.31
Sox1P53783 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.11□□□□□ -0.31
Sox1P53783 Gm11246-201ENSMUST00000120880 345 ntBASIC13.11□□□□□ -0.31
Sox1P53783 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.11□□□□□ -0.31
Sox1P53783 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.11□□□□□ -0.31
Sox1P53783 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox1P53783 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox1P53783 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox1P53783 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox1P53783 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.11□□□□□ -0.31
Sox1P53783 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sox1P53783 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Sox1P53783 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.11□□□□□ -0.31
Sox1P53783 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.11□□□□□ -0.31
Sox1P53783 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox1P53783 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox1P53783 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Gm13182-201ENSMUST00000122241 312 ntBASIC13.1□□□□□ -0.31
Sox1P53783 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Gm4862-201ENSMUST00000170405 438 ntBASIC13.1□□□□□ -0.31
Sox1P53783 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.1□□□□□ -0.31
Sox1P53783 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.1□□□□□ -0.31
Sox1P53783 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.1□□□□□ -0.31
Sox1P53783 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox1P53783 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.1□□□□□ -0.31
Sox1P53783 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.1□□□□□ -0.31
Sox1P53783 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox1P53783 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.1□□□□□ -0.31
Sox1P53783 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox1P53783 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox1P53783 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox1P53783 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox1P53783 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sox1P53783 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox1P53783 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox1P53783 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Sox1P53783 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.09□□□□□ -0.31
Sox1P53783 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.09□□□□□ -0.31
Sox1P53783 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sox1P53783 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox1P53783 Gm15036-201ENSMUST00000118880 400 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms