Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Gm27618-201ENSMUST00000183671 60 ntBASIC10.68□□□□□ -0.7
Nkx2-1P50220 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Gm44344-201ENSMUST00000200287 129 ntBASIC10.68□□□□□ -0.7
Nkx2-1P50220 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.68□□□□□ -0.7
Nkx2-1P50220 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.68□□□□□ -0.7
Nkx2-1P50220 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Nkx2-1P50220 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm13453-201ENSMUST00000118708 357 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm12403-201ENSMUST00000121384 959 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.67□□□□□ -0.7
Nkx2-1P50220 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Nkx2-1P50220 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.66□□□□□ -0.7
Nkx2-1P50220 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nkx2-1P50220 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms