Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Srp9P49962 Gm11524-201ENSMUST00000119349 807 ntBASIC10.96□□□□□ -0.65
Srp9P49962 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.96□□□□□ -0.65
Srp9P49962 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.96□□□□□ -0.65
Srp9P49962 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.96□□□□□ -0.65
Srp9P49962 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Srp9P49962 Gm5354-201ENSMUST00000182417 973 ntBASIC10.96□□□□□ -0.65
Srp9P49962 Gm43094-201ENSMUST00000196549 921 ntBASIC10.96□□□□□ -0.65
Srp9P49962 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.96□□□□□ -0.65
Srp9P49962 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.96□□□□□ -0.65
Srp9P49962 Gm19220-201ENSMUST00000222682 803 ntBASIC10.96□□□□□ -0.65
Srp9P49962 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Srp9P49962 Gm5161-201ENSMUST00000075243 853 ntBASIC10.96□□□□□ -0.65
Srp9P49962 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Srp9P49962 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Srp9P49962 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Srp9P49962 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.66
Srp9P49962 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Srp9P49962 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.95□□□□□ -0.66
Srp9P49962 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Srp9P49962 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Gm22189-201ENSMUST00000103822 86 ntBASIC10.95□□□□□ -0.66
Srp9P49962 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.95□□□□□ -0.66
Srp9P49962 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.95□□□□□ -0.66
Srp9P49962 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.95□□□□□ -0.66
Srp9P49962 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.95□□□□□ -0.66
Srp9P49962 Gm7730-201ENSMUST00000212486 454 ntBASIC10.95□□□□□ -0.66
Srp9P49962 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.95□□□□□ -0.66
Srp9P49962 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.95□□□□□ -0.66
Srp9P49962 Gm24447-201ENSMUST00000083977 338 ntBASIC10.95□□□□□ -0.66
Srp9P49962 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Srp9P49962 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.95□□□□□ -0.66
Srp9P49962 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Srp9P49962 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.95□□□□□ -0.66
Srp9P49962 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.95□□□□□ -0.66
Srp9P49962 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.95□□□□□ -0.66
Srp9P49962 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Srp9P49962 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.94□□□□□ -0.66
Srp9P49962 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Srp9P49962 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Srp9P49962 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Srp9P49962 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms