Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cdx2P43241 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cdx2P43241 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.21□□□□□ -0.45
Cdx2P43241 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx2P43241 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx2P43241 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cdx2P43241 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx2P43241 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx2P43241 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cdx2P43241 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx2P43241 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx2P43241 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx2P43241 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdx2P43241 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdx2P43241 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdx2P43241 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Gm24845-201ENSMUST00000158034 109 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Gm16296-201ENSMUST00000159905 325 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdx2P43241 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Gm27552-201ENSMUST00000183351 62 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Gm27844-201ENSMUST00000183613 62 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.2□□□□□ -0.46
Cdx2P43241 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cdx2P43241 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdx2P43241 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cdx2P43241 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Cdx2P43241 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdx2P43241 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.2□□□□□ -0.46
Cdx2P43241 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.2□□□□□ -0.46
Cdx2P43241 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Cdx2P43241 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdx2P43241 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cdx2P43241 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdx2P43241 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cdx2P43241 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdx2P43241 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdx2P43241 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Gm14832-201ENSMUST00000121289 322 ntBASIC12.19□□□□□ -0.46
Cdx2P43241 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.19□□□□□ -0.46
Cdx2P43241 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.19□□□□□ -0.46
Cdx2P43241 Gm6963-201ENSMUST00000147879 379 ntBASIC12.19□□□□□ -0.46
Cdx2P43241 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.19□□□□□ -0.46
Cdx2P43241 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.19□□□□□ -0.46
Cdx2P43241 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.19□□□□□ -0.46
Cdx2P43241 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.19□□□□□ -0.46
Cdx2P43241 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.19□□□□□ -0.46
Cdx2P43241 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdx2P43241 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdx2P43241 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms