Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Gm14314-201ENSMUST00000118225 1015 ntBASIC18.3■□□□□ 0.52
Kdm5cP41230 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Kdm5cP41230 Mir6998-201ENSMUST00000183343 64 ntBASIC18.3■□□□□ 0.52
Kdm5cP41230 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Kdm5cP41230 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 CT571245.2-201ENSMUST00000218421 305 ntBASIC18.3■□□□□ 0.52
Kdm5cP41230 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Kdm5cP41230 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Kdm5cP41230 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Kdm5cP41230 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC18.3■□□□□ 0.52
Kdm5cP41230 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC18.3■□□□□ 0.52
Kdm5cP41230 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC18.3■□□□□ 0.52
Kdm5cP41230 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Gm6771-201ENSMUST00000182716 1001 ntBASIC18.3■□□□□ 0.52
Kdm5cP41230 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Gm3028-201ENSMUST00000213805 1119 ntBASIC18.3■□□□□ 0.52
Kdm5cP41230 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Gm10288-201ENSMUST00000084614 537 ntBASIC18.3■□□□□ 0.52
Kdm5cP41230 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Kdm5cP41230 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC18.29■□□□□ 0.52
Kdm5cP41230 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 Gm7114-201ENSMUST00000190159 1789 ntBASIC18.29■□□□□ 0.52
Kdm5cP41230 Gm16166-201ENSMUST00000118291 787 ntBASIC18.29■□□□□ 0.52
Kdm5cP41230 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC18.29■□□□□ 0.52
Kdm5cP41230 Gm25072-201ENSMUST00000175233 235 ntBASIC18.29■□□□□ 0.52
Kdm5cP41230 Gm23771-201ENSMUST00000178702 110 ntBASIC18.29■□□□□ 0.52
Kdm5cP41230 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC18.29■□□□□ 0.52
Kdm5cP41230 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Kdm5cP41230 Gm5847-201ENSMUST00000178959 1595 ntBASIC18.28■□□□□ 0.52
Kdm5cP41230 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Il17rd-203ENSMUST00000225146 3366 ntBASIC18.28■□□□□ 0.52
Kdm5cP41230 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Gm26286-201ENSMUST00000104166 134 ntBASIC18.28■□□□□ 0.52
Kdm5cP41230 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.28■□□□□ 0.52
Kdm5cP41230 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Kdm5cP41230 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kdm5cP41230 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Kdm5cP41230 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kdm5cP41230 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Kdm5cP41230 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kdm5cP41230 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kdm5cP41230 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kdm5cP41230 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Kdm5cP41230 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kdm5cP41230 Gm24891-201ENSMUST00000104391 136 ntBASIC18.27■□□□□ 0.52
Kdm5cP41230 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC18.27■□□□□ 0.52
Kdm5cP41230 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC18.27■□□□□ 0.52
Kdm5cP41230 Gm37458-201ENSMUST00000194055 410 ntBASIC18.27■□□□□ 0.52
Kdm5cP41230 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
Kdm5cP41230 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kdm5cP41230 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Kdm5cP41230 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Kdm5cP41230 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Kdm5cP41230 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Kdm5cP41230 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Kdm5cP41230 Gm30238-201ENSMUST00000195528 2603 ntBASIC18.27■□□□□ 0.51
Kdm5cP41230 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Kdm5cP41230 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Kdm5cP41230 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Kdm5cP41230 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Kdm5cP41230 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Kdm5cP41230 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms