Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nckap1P28660 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.83□□□□□ -0.36
Nckap1P28660 Gm15236-201ENSMUST00000117309 379 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Gm15808-201ENSMUST00000119046 604 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Nckap1P28660 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Nckap1P28660 Gm23363-201ENSMUST00000175024 79 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.83□□□□□ -0.36
Nckap1P28660 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Gm37259-201ENSMUST00000193903 849 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Gm18056-201ENSMUST00000207670 568 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Gm18061-201ENSMUST00000208350 562 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Gm18063-201ENSMUST00000208529 568 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Gm18052-201ENSMUST00000208750 559 ntBASIC12.83□□□□□ -0.36
Nckap1P28660 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.83□□□□□ -0.36
Nckap1P28660 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.83□□□□□ -0.36
Nckap1P28660 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Nckap1P28660 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.83□□□□□ -0.36
Nckap1P28660 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nckap1P28660 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Nckap1P28660 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.82□□□□□ -0.36
Nckap1P28660 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Nckap1P28660 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Nckap1P28660 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nckap1P28660 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nckap1P28660 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nckap1P28660 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Nckap1P28660 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.82□□□□□ -0.36
Nckap1P28660 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Gm13492-201ENSMUST00000119772 665 ntBASIC12.82□□□□□ -0.36
Nckap1P28660 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.82□□□□□ -0.36
Nckap1P28660 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Gm6082-201ENSMUST00000215204 454 ntBASIC12.82□□□□□ -0.36
Nckap1P28660 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.82□□□□□ -0.36
Nckap1P28660 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.82□□□□□ -0.36
Nckap1P28660 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nckap1P28660 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Nckap1P28660 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nckap1P28660 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.81□□□□□ -0.36
Nckap1P28660 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.81□□□□□ -0.36
Nckap1P28660 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nckap1P28660 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nckap1P28660 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nckap1P28660 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.81□□□□□ -0.36
Nckap1P28660 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms