Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cbx3P23198 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Cbx3P23198 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cbx3P23198 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Cbx3P23198 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cbx3P23198 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Cbx3P23198 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.7□□□□□ -0.54
Cbx3P23198 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.7□□□□□ -0.54
Cbx3P23198 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.7□□□□□ -0.54
Cbx3P23198 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.7□□□□□ -0.54
Cbx3P23198 Gm15483-201ENSMUST00000120338 456 ntBASIC11.7□□□□□ -0.54
Cbx3P23198 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.7□□□□□ -0.54
Cbx3P23198 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Cbx3P23198 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cbx3P23198 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.7□□□□□ -0.54
Cbx3P23198 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cbx3P23198 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.7□□□□□ -0.54
Cbx3P23198 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.7□□□□□ -0.54
Cbx3P23198 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.7□□□□□ -0.54
Cbx3P23198 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.7□□□□□ -0.54
Cbx3P23198 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.7□□□□□ -0.54
Cbx3P23198 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.7□□□□□ -0.54
Cbx3P23198 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cbx3P23198 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cbx3P23198 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cbx3P23198 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.69□□□□□ -0.54
Cbx3P23198 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.69□□□□□ -0.54
Cbx3P23198 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cbx3P23198 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.69□□□□□ -0.54
Cbx3P23198 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.69□□□□□ -0.54
Cbx3P23198 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Cbx3P23198 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Gm6973-201ENSMUST00000117080 721 ntBASIC11.69□□□□□ -0.54
Cbx3P23198 Gm11025-201ENSMUST00000140773 466 ntBASIC11.69□□□□□ -0.54
Cbx3P23198 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
Cbx3P23198 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.69□□□□□ -0.54
Cbx3P23198 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.69□□□□□ -0.54
Cbx3P23198 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cbx3P23198 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.69□□□□□ -0.54
Cbx3P23198 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Cbx3P23198 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
Cbx3P23198 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms