Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fv4P11370 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fv4P11370 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fv4P11370 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fv4P11370 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fv4P11370 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Fv4P11370 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fv4P11370 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Fv4P11370 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Fv4P11370 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Fv4P11370 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Fv4P11370 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.43□□□□□ -0.42
Fv4P11370 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Fv4P11370 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.43□□□□□ -0.42
Fv4P11370 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.43□□□□□ -0.42
Fv4P11370 Gm28911-201ENSMUST00000188837 117 ntBASIC12.43□□□□□ -0.42
Fv4P11370 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.43□□□□□ -0.42
Fv4P11370 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.43□□□□□ -0.42
Fv4P11370 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Fv4P11370 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.43□□□□□ -0.42
Fv4P11370 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.43□□□□□ -0.42
Fv4P11370 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.43□□□□□ -0.42
Fv4P11370 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Fv4P11370 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fv4P11370 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.43□□□□□ -0.42
Fv4P11370 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Fv4P11370 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.42□□□□□ -0.42
Fv4P11370 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.42□□□□□ -0.42
Fv4P11370 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.42□□□□□ -0.42
Fv4P11370 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.42□□□□□ -0.42
Fv4P11370 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.42□□□□□ -0.42
Fv4P11370 Gm18018-201ENSMUST00000198273 408 ntBASIC12.42□□□□□ -0.42
Fv4P11370 Gm38671-201ENSMUST00000200573 130 ntBASIC12.42□□□□□ -0.42
Fv4P11370 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.42□□□□□ -0.42
Fv4P11370 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.42□□□□□ -0.42
Fv4P11370 Gm8598-201ENSMUST00000221184 836 ntBASIC12.42□□□□□ -0.42
Fv4P11370 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.42□□□□□ -0.42
Fv4P11370 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.42□□□□□ -0.42
Fv4P11370 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Fv4P11370 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Fv4P11370 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fv4P11370 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Fv4P11370 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Fv4P11370 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fv4P11370 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms