Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxc6P10629 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Hoxc6P10629 Gm12266-201ENSMUST00000120311 962 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 Gm13461-201ENSMUST00000120980 662 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 Gm24749-201ENSMUST00000157838 343 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.24□□□□□ -0.13
Hoxc6P10629 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Hoxc6P10629 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 Gm32999-201ENSMUST00000192693 562 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 Gm37666-201ENSMUST00000194110 866 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Mir339-201ENSMUST00000083659 96 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hoxc6P10629 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.24□□□□□ -0.13
Hoxc6P10629 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hoxc6P10629 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc6P10629 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Gm14999-201ENSMUST00000121039 624 ntBASIC14.23□□□□□ -0.13
Hoxc6P10629 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.23□□□□□ -0.13
Hoxc6P10629 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Gm5070-201ENSMUST00000177599 862 ntBASIC14.23□□□□□ -0.13
Hoxc6P10629 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.23□□□□□ -0.13
Hoxc6P10629 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.23□□□□□ -0.13
Hoxc6P10629 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.23□□□□□ -0.13
Hoxc6P10629 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hoxc6P10629 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.22□□□□□ -0.13
Hoxc6P10629 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc6P10629 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hoxc6P10629 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc6P10629 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm12616-201ENSMUST00000118594 382 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.22□□□□□ -0.13
Hoxc6P10629 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm12624-201ENSMUST00000177615 382 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm12621-201ENSMUST00000177760 382 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm12615-201ENSMUST00000177970 382 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm12622-201ENSMUST00000177975 382 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm12627-201ENSMUST00000178412 382 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm12625-201ENSMUST00000179122 382 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm12614-201ENSMUST00000179586 382 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm12613-201ENSMUST00000180323 382 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm37835-201ENSMUST00000193305 361 ntBASIC14.22□□□□□ -0.13
Hoxc6P10629 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.22□□□□□ -0.13
Hoxc6P10629 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms