Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
Ccl1P10146 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.96□□□□□ -0.82
Ccl1P10146 Gm12428-201ENSMUST00000119844 727 ntBASIC9.96□□□□□ -0.82
Ccl1P10146 Gm15393-201ENSMUST00000120499 219 ntBASIC9.96□□□□□ -0.82
Ccl1P10146 Gm11745-201ENSMUST00000121669 448 ntBASIC9.96□□□□□ -0.82
Ccl1P10146 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.96□□□□□ -0.82
Ccl1P10146 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.96□□□□□ -0.82
Ccl1P10146 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC9.96□□□□□ -0.82
Ccl1P10146 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccl1P10146 Mir3113-201ENSMUST00000175478 76 ntBASIC9.96□□□□□ -0.82
Ccl1P10146 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccl1P10146 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.96□□□□□ -0.82
Ccl1P10146 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC9.96□□□□□ -0.82
Ccl1P10146 Gm45612-201ENSMUST00000211320 160 ntBASIC9.96□□□□□ -0.82
Ccl1P10146 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.96□□□□□ -0.82
Ccl1P10146 Bloc1s5-203ENSMUST00000224902 612 ntBASIC9.96□□□□□ -0.82
Ccl1P10146 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccl1P10146 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccl1P10146 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Ccl1P10146 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Ccl1P10146 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Ccl1P10146 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Ccl1P10146 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccl1P10146 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Ccl1P10146 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccl1P10146 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.82
Ccl1P10146 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.95□□□□□ -0.82
Ccl1P10146 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl1P10146 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccl1P10146 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
Ccl1P10146 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.95□□□□□ -0.82
Ccl1P10146 Mir1897-201ENSMUST00000122581 272 ntBASIC9.95□□□□□ -0.82
Ccl1P10146 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Ccl1P10146 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.95□□□□□ -0.82
Ccl1P10146 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC9.95□□□□□ -0.82
Ccl1P10146 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC9.95□□□□□ -0.82
Ccl1P10146 Gm17330-201ENSMUST00000221047 165 ntBASIC9.95□□□□□ -0.82
Ccl1P10146 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.95□□□□□ -0.82
Ccl1P10146 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.95□□□□□ -0.82
Ccl1P10146 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
Ccl1P10146 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccl1P10146 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.95□□□□□ -0.82
Ccl1P10146 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Ccl1P10146 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Ccl1P10146 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Ccl1P10146 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms