Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
P04940 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04940 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04940 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.44□□□□□ -0.74
P04940 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
P04940 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04940 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04940 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
P04940 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.43□□□□□ -0.74
P04940 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.43□□□□□ -0.74
P04940 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.43□□□□□ -0.74
P04940 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.43□□□□□ -0.74
P04940 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
P04940 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.43□□□□□ -0.74
P04940 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
P04940 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.43□□□□□ -0.74
P04940 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.43□□□□□ -0.74
P04940 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.43□□□□□ -0.74
P04940 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.43□□□□□ -0.74
P04940 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.43□□□□□ -0.74
P04940 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
P04940 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.43□□□□□ -0.74
P04940 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.43□□□□□ -0.74
P04940 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.43□□□□□ -0.74
P04940 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.43□□□□□ -0.74
P04940 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.43□□□□□ -0.74
P04940 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.43□□□□□ -0.74
P04940 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
P04940 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.43□□□□□ -0.74
P04940 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
P04940 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
P04940 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
P04940 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.42□□□□□ -0.74
P04940 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.42□□□□□ -0.74
P04940 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
P04940 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
P04940 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.42□□□□□ -0.74
P04940 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
P04940 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
P04940 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.42□□□□□ -0.74
P04940 Gm16177-201ENSMUST00000120728 718 ntBASIC10.42□□□□□ -0.74
P04940 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
P04940 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Gm16296-201ENSMUST00000159905 325 ntBASIC10.42□□□□□ -0.74
P04940 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
P04940 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Gm26035-201ENSMUST00000083065 308 ntBASIC10.42□□□□□ -0.74
P04940 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.42□□□□□ -0.74
P04940 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
P04940 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
P04940 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms