Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hoxa3P02831 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.82□□□□□ -0.68
Hoxa3P02831 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hoxa3P02831 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.81□□□□□ -0.68
Hoxa3P02831 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.81□□□□□ -0.68
Hoxa3P02831 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm11978-201ENSMUST00000122315 466 ntBASIC10.81□□□□□ -0.68
Hoxa3P02831 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.81□□□□□ -0.68
Hoxa3P02831 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.81□□□□□ -0.68
Hoxa3P02831 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Olfr582-201ENSMUST00000098212 960 ntBASIC10.81□□□□□ -0.68
Hoxa3P02831 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Hoxa3P02831 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hoxa3P02831 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Hoxa3P02831 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Hoxa3P02831 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Hoxa3P02831 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Gm2231-201ENSMUST00000125661 612 ntBASIC10.8□□□□□ -0.68
Hoxa3P02831 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.8□□□□□ -0.68
Hoxa3P02831 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.8□□□□□ -0.68
Hoxa3P02831 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Gm43133-201ENSMUST00000197472 463 ntBASIC10.8□□□□□ -0.68
Hoxa3P02831 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.8□□□□□ -0.68
Hoxa3P02831 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.8□□□□□ -0.68
Hoxa3P02831 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.8□□□□□ -0.68
Hoxa3P02831 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.8□□□□□ -0.68
Hoxa3P02831 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Hoxa3P02831 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Hoxa3P02831 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms