Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.41□□□□□ -0.9
TcraP01849 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TcraP01849 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.41□□□□□ -0.9
TcraP01849 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
TcraP01849 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
TcraP01849 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.4□□□□□ -0.9
TcraP01849 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TcraP01849 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TcraP01849 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC9.4□□□□□ -0.9
TcraP01849 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TcraP01849 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
TcraP01849 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.4□□□□□ -0.9
TcraP01849 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
TcraP01849 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
TcraP01849 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.4□□□□□ -0.9
TcraP01849 Gm45453-201ENSMUST00000211758 853 ntBASIC9.4□□□□□ -0.9
TcraP01849 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
TcraP01849 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.4□□□□□ -0.9
TcraP01849 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.4□□□□□ -0.9
TcraP01849 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
TcraP01849 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.4□□□□□ -0.9
TcraP01849 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.4□□□□□ -0.91
TcraP01849 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TcraP01849 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
TcraP01849 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TcraP01849 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
TcraP01849 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
TcraP01849 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
TcraP01849 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
TcraP01849 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.39□□□□□ -0.91
TcraP01849 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Gm8410-201ENSMUST00000117225 605 ntBASIC9.39□□□□□ -0.91
TcraP01849 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC9.39□□□□□ -0.91
TcraP01849 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC9.39□□□□□ -0.91
TcraP01849 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC9.39□□□□□ -0.91
TcraP01849 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
TcraP01849 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC9.39□□□□□ -0.91
TcraP01849 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC9.39□□□□□ -0.91
TcraP01849 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC9.39□□□□□ -0.91
TcraP01849 Mir7221-201ENSMUST00000184009 72 ntBASIC9.39□□□□□ -0.91
TcraP01849 Gm44335-201ENSMUST00000196879 141 ntBASIC9.39□□□□□ -0.91
TcraP01849 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
TcraP01849 Gm44297-201ENSMUST00000198304 141 ntBASIC9.39□□□□□ -0.91
TcraP01849 Gm44346-201ENSMUST00000198851 141 ntBASIC9.39□□□□□ -0.91
TcraP01849 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
TcraP01849 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Mir125a-201ENSMUST00000083545 68 ntBASIC9.39□□□□□ -0.91
TcraP01849 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
TcraP01849 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
TcraP01849 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
TcraP01849 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.39□□□□□ -0.91
TcraP01849 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
TcraP01849 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC9.39□□□□□ -0.91
TcraP01849 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
TcraP01849 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
TcraP01849 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
TcraP01849 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms