Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.07□□□□□ -0.8
P01728 Gm27618-201ENSMUST00000183671 60 ntBASIC10.07□□□□□ -0.8
P01728 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Gm19078-201ENSMUST00000206311 727 ntBASIC10.07□□□□□ -0.8
P01728 Gm8227-201ENSMUST00000223306 571 ntBASIC10.07□□□□□ -0.8
P01728 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.07□□□□□ -0.8
P01728 Gm26315-201ENSMUST00000083890 321 ntBASIC10.07□□□□□ -0.8
P01728 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
P01728 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
P01728 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.07□□□□□ -0.8
P01728 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
P01728 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
P01728 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.06□□□□□ -0.8
P01728 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.06□□□□□ -0.8
P01728 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
P01728 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
P01728 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.06□□□□□ -0.8
P01728 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
P01728 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
P01728 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.06□□□□□ -0.8
P01728 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
P01728 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.06□□□□□ -0.8
P01728 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
P01728 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
P01728 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.06□□□□□ -0.8
P01728 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
P01728 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Gm27702-201ENSMUST00000184512 56 ntBASIC10.06□□□□□ -0.8
P01728 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.06□□□□□ -0.8
P01728 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.06□□□□□ -0.8
P01728 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.06□□□□□ -0.8
P01728 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
P01728 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.06□□□□□ -0.8
P01728 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.06□□□□□ -0.8
P01728 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.06□□□□□ -0.8
P01728 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
P01728 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
P01728 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.06□□□□□ -0.8
P01728 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.06□□□□□ -0.8
P01728 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
P01728 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
P01728 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
P01728 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms