Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NgfP01139 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
NgfP01139 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
NgfP01139 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.32□□□□□ -0.6
NgfP01139 Gm15703-201ENSMUST00000120250 880 ntBASIC11.32□□□□□ -0.6
NgfP01139 Gm13315-201ENSMUST00000120376 991 ntBASIC11.32□□□□□ -0.6
NgfP01139 Gm6963-201ENSMUST00000147879 379 ntBASIC11.32□□□□□ -0.6
NgfP01139 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
NgfP01139 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.32□□□□□ -0.6
NgfP01139 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NgfP01139 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Gm28882-201ENSMUST00000185504 314 ntBASIC11.32□□□□□ -0.6
NgfP01139 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.32□□□□□ -0.6
NgfP01139 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.32□□□□□ -0.6
NgfP01139 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
NgfP01139 Gm39404-201ENSMUST00000216350 313 ntBASIC11.32□□□□□ -0.6
NgfP01139 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.32□□□□□ -0.6
NgfP01139 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.32□□□□□ -0.6
NgfP01139 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.32□□□□□ -0.6
NgfP01139 Gm8385-201ENSMUST00000058999 643 ntBASIC11.32□□□□□ -0.6
NgfP01139 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
NgfP01139 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NgfP01139 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
NgfP01139 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.32□□□□□ -0.6
NgfP01139 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NgfP01139 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
NgfP01139 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.31□□□□□ -0.6
NgfP01139 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.31□□□□□ -0.6
NgfP01139 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.31□□□□□ -0.6
NgfP01139 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.31□□□□□ -0.6
NgfP01139 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.31□□□□□ -0.6
NgfP01139 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
NgfP01139 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
NgfP01139 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.31□□□□□ -0.6
NgfP01139 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
NgfP01139 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.31□□□□□ -0.6
NgfP01139 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.31□□□□□ -0.6
NgfP01139 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.31□□□□□ -0.6
NgfP01139 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Mir6927-201ENSMUST00000184494 71 ntBASIC11.31□□□□□ -0.6
NgfP01139 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.31□□□□□ -0.6
NgfP01139 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Gm3786-201ENSMUST00000202659 378 ntBASIC11.31□□□□□ -0.6
NgfP01139 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.31□□□□□ -0.6
NgfP01139 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Gzmn-202ENSMUST00000225535 989 ntBASIC11.31□□□□□ -0.6
NgfP01139 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.31□□□□□ -0.6
NgfP01139 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.31□□□□□ -0.6
NgfP01139 Gm10076-201ENSMUST00000073238 384 ntBASIC11.31□□□□□ -0.6
NgfP01139 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.31□□□□□ -0.6
NgfP01139 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
NgfP01139 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.31□□□□□ -0.6
NgfP01139 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.31□□□□□ -0.6
NgfP01139 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.31□□□□□ -0.6
NgfP01139 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
NgfP01139 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NgfP01139 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NgfP01139 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NgfP01139 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.3□□□□□ -0.6
NgfP01139 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms