Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Vti1aO89116 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1aO89116 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.9□□□□□ -0.18
Vti1aO89116 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.9□□□□□ -0.18
Vti1aO89116 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Vti1aO89116 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Gm4986-201ENSMUST00000119731 549 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Gm13297-201ENSMUST00000120205 934 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Gm16570-201ENSMUST00000161951 436 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Mospd4-201ENSMUST00000180618 576 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Gm6621-201ENSMUST00000193251 772 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Gm37466-201ENSMUST00000195692 652 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Gm4768-201ENSMUST00000206199 686 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.9□□□□□ -0.18
Vti1aO89116 Gm6458-201ENSMUST00000211573 635 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.9□□□□□ -0.18
Vti1aO89116 Mir433-201ENSMUST00000093564 124 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.9□□□□□ -0.18
Vti1aO89116 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Vti1aO89116 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.9□□□□□ -0.18
Vti1aO89116 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1aO89116 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Vti1aO89116 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.9□□□□□ -0.19
Vti1aO89116 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.89□□□□□ -0.19
Vti1aO89116 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vti1aO89116 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vti1aO89116 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.89□□□□□ -0.19
Vti1aO89116 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vti1aO89116 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vti1aO89116 Gm29199-201ENSMUST00000187766 775 ntBASIC13.89□□□□□ -0.19
Vti1aO89116 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.89□□□□□ -0.19
Vti1aO89116 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vti1aO89116 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.89□□□□□ -0.19
Vti1aO89116 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.89□□□□□ -0.19
Vti1aO89116 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vti1aO89116 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Vti1aO89116 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vti1aO89116 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Vti1aO89116 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vti1aO89116 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms