Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.28□□□□□ -0.28
CopeO89079 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.28□□□□□ -0.28
CopeO89079 Gm15487-201ENSMUST00000122373 465 ntBASIC13.28□□□□□ -0.28
CopeO89079 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.28□□□□□ -0.28
CopeO89079 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Gm37935-201ENSMUST00000192012 982 ntBASIC13.28□□□□□ -0.28
CopeO89079 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CopeO89079 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.28□□□□□ -0.28
CopeO89079 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.28□□□□□ -0.28
CopeO89079 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.28□□□□□ -0.28
CopeO89079 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
CopeO89079 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.28□□□□□ -0.28
CopeO89079 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CopeO89079 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.28□□□□□ -0.28
CopeO89079 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CopeO89079 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CopeO89079 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CopeO89079 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CopeO89079 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CopeO89079 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CopeO89079 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CopeO89079 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CopeO89079 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CopeO89079 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CopeO89079 Gm11978-201ENSMUST00000122315 466 ntBASIC13.27□□□□□ -0.29
CopeO89079 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.27□□□□□ -0.29
CopeO89079 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.27□□□□□ -0.29
CopeO89079 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.27□□□□□ -0.29
CopeO89079 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.27□□□□□ -0.29
CopeO89079 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CopeO89079 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.27□□□□□ -0.29
CopeO89079 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.27□□□□□ -0.29
CopeO89079 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.27□□□□□ -0.29
CopeO89079 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CopeO89079 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.27□□□□□ -0.29
CopeO89079 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CopeO89079 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CopeO89079 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CopeO89079 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CopeO89079 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.26□□□□□ -0.29
CopeO89079 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.26□□□□□ -0.29
CopeO89079 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.26□□□□□ -0.29
CopeO89079 Gm15371-201ENSMUST00000117057 784 ntBASIC13.26□□□□□ -0.29
CopeO89079 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CopeO89079 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Gm5354-201ENSMUST00000182417 973 ntBASIC13.26□□□□□ -0.29
CopeO89079 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.26□□□□□ -0.29
CopeO89079 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CopeO89079 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.26□□□□□ -0.29
CopeO89079 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.26□□□□□ -0.29
CopeO89079 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CopeO89079 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms