Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.35□□□□□ -0.43
Hcn1O88704 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hcn1O88704 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Gm5687-201ENSMUST00000118252 640 ntBASIC12.35□□□□□ -0.43
Hcn1O88704 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.35□□□□□ -0.43
Hcn1O88704 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.35□□□□□ -0.43
Hcn1O88704 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.35□□□□□ -0.43
Hcn1O88704 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.35□□□□□ -0.43
Hcn1O88704 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Hcn1O88704 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.35□□□□□ -0.43
Hcn1O88704 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hcn1O88704 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.35□□□□□ -0.43
Hcn1O88704 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hcn1O88704 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hcn1O88704 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.34□□□□□ -0.43
Hcn1O88704 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.34□□□□□ -0.43
Hcn1O88704 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.34□□□□□ -0.43
Hcn1O88704 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.34□□□□□ -0.43
Hcn1O88704 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.34□□□□□ -0.43
Hcn1O88704 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.34□□□□□ -0.43
Hcn1O88704 Gm17150-201ENSMUST00000165577 381 ntBASIC12.34□□□□□ -0.43
Hcn1O88704 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Gm27486-201ENSMUST00000184923 80 ntBASIC12.34□□□□□ -0.43
Hcn1O88704 Gm43433-201ENSMUST00000196573 481 ntBASIC12.34□□□□□ -0.43
Hcn1O88704 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.34□□□□□ -0.43
Hcn1O88704 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.34□□□□□ -0.43
Hcn1O88704 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.34□□□□□ -0.43
Hcn1O88704 Itm2b-204ENSMUST00000228637 783 ntBASIC12.34□□□□□ -0.43
Hcn1O88704 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.34□□□□□ -0.43
Hcn1O88704 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hcn1O88704 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hcn1O88704 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.33□□□□□ -0.43
Hcn1O88704 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hcn1O88704 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.33□□□□□ -0.44
Hcn1O88704 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Hcn1O88704 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Hcn1O88704 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.33□□□□□ -0.44
Hcn1O88704 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Gm11814-201ENSMUST00000119515 929 ntBASIC12.33□□□□□ -0.44
Hcn1O88704 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.33□□□□□ -0.44
Hcn1O88704 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.33□□□□□ -0.44
Hcn1O88704 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Hcn1O88704 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.33□□□□□ -0.44
Hcn1O88704 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.33□□□□□ -0.44
Hcn1O88704 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.33□□□□□ -0.44
Hcn1O88704 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Hcn1O88704 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.33□□□□□ -0.44
Hcn1O88704 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hcn1O88704 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms