Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Gm8835-201ENSMUST00000173096 1169 ntBASIC13□□□□□ -0.33
Dnmt3aO88508 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13□□□□□ -0.33
Dnmt3aO88508 Gm37497-201ENSMUST00000195830 798 ntBASIC13□□□□□ -0.33
Dnmt3aO88508 Gm19931-201ENSMUST00000198920 368 ntBASIC13□□□□□ -0.33
Dnmt3aO88508 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Dnmt3aO88508 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13□□□□□ -0.33
Dnmt3aO88508 Gm2594-201ENSMUST00000214774 742 ntBASIC13□□□□□ -0.33
Dnmt3aO88508 Gm18515-201ENSMUST00000219755 797 ntBASIC13□□□□□ -0.33
Dnmt3aO88508 Gm2824-203ENSMUST00000226189 1228 ntBASIC13□□□□□ -0.33
Dnmt3aO88508 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3aO88508 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3aO88508 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3aO88508 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3aO88508 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3aO88508 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3aO88508 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3aO88508 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13□□□□□ -0.33
Dnmt3aO88508 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3aO88508 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dnmt3aO88508 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Gm6458-201ENSMUST00000211573 635 ntBASIC12.99□□□□□ -0.33
Dnmt3aO88508 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.99□□□□□ -0.33
Dnmt3aO88508 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.99□□□□□ -0.33
Dnmt3aO88508 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.99□□□□□ -0.33
Dnmt3aO88508 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.99□□□□□ -0.33
Dnmt3aO88508 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.98□□□□□ -0.33
Dnmt3aO88508 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.98□□□□□ -0.33
Dnmt3aO88508 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Gm8805-201ENSMUST00000117848 313 ntBASIC12.98□□□□□ -0.33
Dnmt3aO88508 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.98□□□□□ -0.33
Dnmt3aO88508 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Gm4271-201ENSMUST00000174444 973 ntBASIC12.98□□□□□ -0.33
Dnmt3aO88508 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Gm19087-201ENSMUST00000191430 946 ntBASIC12.98□□□□□ -0.33
Dnmt3aO88508 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.98□□□□□ -0.33
Dnmt3aO88508 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Dnmt3aO88508 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.98□□□□□ -0.33
Dnmt3aO88508 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms