Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Col5a1O88207 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col5a1O88207 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Col5a1O88207 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.45□□□□□ -0.58
Col5a1O88207 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col5a1O88207 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Col5a1O88207 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col5a1O88207 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Col5a1O88207 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Col5a1O88207 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Gm15703-201ENSMUST00000120250 880 ntBASIC11.44□□□□□ -0.58
Col5a1O88207 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Col5a1O88207 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.44□□□□□ -0.58
Col5a1O88207 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.44□□□□□ -0.58
Col5a1O88207 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Col5a1O88207 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Col5a1O88207 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.44□□□□□ -0.58
Col5a1O88207 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.44□□□□□ -0.58
Col5a1O88207 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
Col5a1O88207 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.44□□□□□ -0.58
Col5a1O88207 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Gm10312-201ENSMUST00000078515 489 ntBASIC11.44□□□□□ -0.58
Col5a1O88207 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Col5a1O88207 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Col5a1O88207 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.44□□□□□ -0.58
Col5a1O88207 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.43□□□□□ -0.58
Col5a1O88207 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Col5a1O88207 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Col5a1O88207 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Col5a1O88207 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.43□□□□□ -0.58
Col5a1O88207 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.43□□□□□ -0.58
Col5a1O88207 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.43□□□□□ -0.58
Col5a1O88207 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Col5a1O88207 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col5a1O88207 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Col5a1O88207 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.43□□□□□ -0.58
Col5a1O88207 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Col5a1O88207 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms