Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgceO70258 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgceO70258 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgceO70258 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgceO70258 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SgceO70258 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SgceO70258 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.56□□□□□ -0.56
SgceO70258 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SgceO70258 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.56□□□□□ -0.56
SgceO70258 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.56□□□□□ -0.56
SgceO70258 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SgceO70258 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.56□□□□□ -0.56
SgceO70258 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.56□□□□□ -0.56
SgceO70258 Gm11918-201ENSMUST00000121660 179 ntBASIC11.56□□□□□ -0.56
SgceO70258 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.56□□□□□ -0.56
SgceO70258 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Gm9908-201ENSMUST00000211534 448 ntBASIC11.56□□□□□ -0.56
SgceO70258 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.56□□□□□ -0.56
SgceO70258 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.56□□□□□ -0.56
SgceO70258 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SgceO70258 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SgceO70258 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SgceO70258 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SgceO70258 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.55□□□□□ -0.56
SgceO70258 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
SgceO70258 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SgceO70258 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.55□□□□□ -0.56
SgceO70258 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.55□□□□□ -0.56
SgceO70258 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Gm14350-201ENSMUST00000116642 640 ntBASIC11.55□□□□□ -0.56
SgceO70258 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.55□□□□□ -0.56
SgceO70258 Gm38671-201ENSMUST00000200573 130 ntBASIC11.55□□□□□ -0.56
SgceO70258 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Gm8463-201ENSMUST00000208573 613 ntBASIC11.55□□□□□ -0.56
SgceO70258 Gm45384-201ENSMUST00000210451 277 ntBASIC11.55□□□□□ -0.56
SgceO70258 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.55□□□□□ -0.56
SgceO70258 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SgceO70258 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SgceO70258 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.55□□□□□ -0.56
SgceO70258 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms