Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb2O55203 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ldb2O55203 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ldb2O55203 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ldb2O55203 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.8□□□□□ -0.36
Ldb2O55203 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ldb2O55203 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.8□□□□□ -0.36
Ldb2O55203 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.8□□□□□ -0.36
Ldb2O55203 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.8□□□□□ -0.36
Ldb2O55203 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.8□□□□□ -0.36
Ldb2O55203 Gm8099-201ENSMUST00000200510 742 ntBASIC12.8□□□□□ -0.36
Ldb2O55203 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Ldb2O55203 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.8□□□□□ -0.36
Ldb2O55203 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ldb2O55203 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ldb2O55203 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.8□□□□□ -0.36
Ldb2O55203 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ldb2O55203 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ldb2O55203 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Ldb2O55203 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Gm14921-201ENSMUST00000118643 908 ntBASIC12.79□□□□□ -0.36
Ldb2O55203 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.79□□□□□ -0.36
Ldb2O55203 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.79□□□□□ -0.36
Ldb2O55203 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
Ldb2O55203 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.79□□□□□ -0.36
Ldb2O55203 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.79□□□□□ -0.36
Ldb2O55203 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.79□□□□□ -0.36
Ldb2O55203 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.79□□□□□ -0.36
Ldb2O55203 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.79□□□□□ -0.36
Ldb2O55203 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ldb2O55203 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.79□□□□□ -0.36
Ldb2O55203 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.79□□□□□ -0.36
Ldb2O55203 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ldb2O55203 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ldb2O55203 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ldb2O55203 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ldb2O55203 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms