Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.14□□□□□ -0.15
Trdmt1O55055 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdmt1O55055 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.13□□□□□ -0.15
Trdmt1O55055 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.13□□□□□ -0.15
Trdmt1O55055 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trdmt1O55055 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
Trdmt1O55055 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.13□□□□□ -0.15
Trdmt1O55055 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trdmt1O55055 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.13□□□□□ -0.15
Trdmt1O55055 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.13□□□□□ -0.15
Trdmt1O55055 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Trdmt1O55055 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trdmt1O55055 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdmt1O55055 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.12□□□□□ -0.15
Trdmt1O55055 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Gm14263-201ENSMUST00000117955 746 ntBASIC14.12□□□□□ -0.15
Trdmt1O55055 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.12□□□□□ -0.15
Trdmt1O55055 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC14.12□□□□□ -0.15
Trdmt1O55055 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.12□□□□□ -0.15
Trdmt1O55055 Gm43947-201ENSMUST00000203019 959 ntBASIC14.12□□□□□ -0.15
Trdmt1O55055 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Trdmt1O55055 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trdmt1O55055 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trdmt1O55055 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Trdmt1O55055 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdmt1O55055 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trdmt1O55055 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.11□□□□□ -0.15
Trdmt1O55055 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.11□□□□□ -0.15
Trdmt1O55055 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Gm24749-201ENSMUST00000157838 343 ntBASIC14.11□□□□□ -0.15
Trdmt1O55055 Gm32999-201ENSMUST00000192693 562 ntBASIC14.11□□□□□ -0.15
Trdmt1O55055 Gm43378-201ENSMUST00000199336 582 ntBASIC14.11□□□□□ -0.15
Trdmt1O55055 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Gm10076-201ENSMUST00000073238 384 ntBASIC14.11□□□□□ -0.15
Trdmt1O55055 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trdmt1O55055 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms