Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.08□□□□□ -0.48
Colca2F8VPY8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Gm12795-201ENSMUST00000117594 539 ntBASIC12.08□□□□□ -0.48
Colca2F8VPY8 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Gm9358-201ENSMUST00000183067 927 ntBASIC12.08□□□□□ -0.48
Colca2F8VPY8 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.08□□□□□ -0.48
Colca2F8VPY8 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.08□□□□□ -0.48
Colca2F8VPY8 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.08□□□□□ -0.48
Colca2F8VPY8 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.08□□□□□ -0.48
Colca2F8VPY8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Colca2F8VPY8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.07□□□□□ -0.48
Colca2F8VPY8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Gm24891-201ENSMUST00000104391 136 ntBASIC12.07□□□□□ -0.48
Colca2F8VPY8 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.07□□□□□ -0.48
Colca2F8VPY8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Gm45398-201ENSMUST00000210561 165 ntBASIC12.07□□□□□ -0.48
Colca2F8VPY8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.07□□□□□ -0.48
Colca2F8VPY8 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.07□□□□□ -0.48
Colca2F8VPY8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Colca2F8VPY8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms