Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Gm5479-201ENSMUST00000160578 435 ntBASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Gm18669-201ENSMUST00000216049 778 ntBASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-2D3Z4R4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Nkx6-2D3Z4R4 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Gm4899-201ENSMUST00000178708 719 ntBASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nkx6-2D3Z4R4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms