Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.42□□□□□ -0.26
Scn1aA2APX8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Scn1aA2APX8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Gm2546-201ENSMUST00000182630 991 ntBASIC13.42□□□□□ -0.26
Scn1aA2APX8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.42□□□□□ -0.26
Scn1aA2APX8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Scn1aA2APX8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Gm15703-201ENSMUST00000120250 880 ntBASIC13.41□□□□□ -0.26
Scn1aA2APX8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.41□□□□□ -0.26
Scn1aA2APX8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.41□□□□□ -0.26
Scn1aA2APX8 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.41□□□□□ -0.26
Scn1aA2APX8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Scn1aA2APX8 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm9083-201ENSMUST00000120423 819 ntBASIC13.4□□□□□ -0.26
Scn1aA2APX8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm17376-201ENSMUST00000166016 84 ntBASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm8885-201ENSMUST00000189382 598 ntBASIC13.4□□□□□ -0.26
Scn1aA2APX8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.4□□□□□ -0.26
Scn1aA2APX8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.4□□□□□ -0.26
Scn1aA2APX8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm14381-201ENSMUST00000122105 414 ntBASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm3096-201ENSMUST00000185770 364 ntBASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scn1aA2APX8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms