Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm12138-201ENSMUST00000122180 951 ntBASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm45059-201ENSMUST00000205558 1077 ntBASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm9816-201ENSMUST00000122292 1414 ntBASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm5356-201ENSMUST00000093326 615 ntBASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Gm28323-201ENSMUST00000186817 2499 ntBASIC9.36□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Trav9n-2A0A0G2JDP3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms