Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lgr5Q9Z1P4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lgr5Q9Z1P4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm14263-201ENSMUST00000117955 746 ntBASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm15703-201ENSMUST00000120250 880 ntBASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm24514-201ENSMUST00000174961 285 ntBASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm25007-201ENSMUST00000083808 133 ntBASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Lgr5Q9Z1P4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Gm23699-201ENSMUST00000158835 135 ntBASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Gm32999-201ENSMUST00000192693 562 ntBASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Acot6-202ENSMUST00000222921 3622 ntBASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lgr5Q9Z1P4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Gm17812-201ENSMUST00000204935 318 ntBASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Gm45598-202ENSMUST00000210719 986 ntBASIC15.31■□□□□ 0.04
Lgr5Q9Z1P4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms