Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cx3cr1Q9Z0D9 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Cx3cr1Q9Z0D9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cx3cr1Q9Z0D9 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Rubie-203ENSMUST00000227803 2430 ntBASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cx3cr1Q9Z0D9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm4875-201ENSMUST00000118257 786 ntBASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Gm29608-201ENSMUST00000190444 463 ntBASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Cx3cr1Q9Z0D9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Cx3cr1Q9Z0D9 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cx3cr1Q9Z0D9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cx3cr1Q9Z0D9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cx3cr1Q9Z0D9 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cx3cr1Q9Z0D9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.67
Cx3cr1Q9Z0D9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms