Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Gm13665-201ENSMUST00000120830 528 ntBASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Gm20482-202ENSMUST00000174729 825 ntBASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Scn8aQ9WTU3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn8aQ9WTU3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Rmrp-201ENSMUST00000157463 271 ntBASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Gm38317-201ENSMUST00000195564 343 ntBASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.87□□□□□ -0.35
Scn8aQ9WTU3 Gm45925-201ENSMUST00000218882 744 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms