Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Mir339-201ENSMUST00000083659 96 ntBASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cpsf3Q9QXK7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Gm14921-201ENSMUST00000118643 908 ntBASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Mir1938-201ENSMUST00000158746 100 ntBASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Gm38092-201ENSMUST00000195600 653 ntBASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cpsf3Q9QXK7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Gm13813-201ENSMUST00000120998 787 ntBASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Gm24548-201ENSMUST00000158650 108 ntBASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Gm38158-201ENSMUST00000194617 339 ntBASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Gm5781-201ENSMUST00000219792 443 ntBASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cpsf3Q9QXK7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms