Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Gm11964-201ENSMUST00000120982 444 ntBASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Gm2991-201ENSMUST00000173338 480 ntBASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Gm38341-201ENSMUST00000195357 515 ntBASIC15.32■□□□□ 0.04
Ube3bQ9ES34 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ube3bQ9ES34 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Gm7783-201ENSMUST00000204795 781 ntBASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ube3bQ9ES34 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Gm44364-201ENSMUST00000198368 141 ntBASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Gm44405-201ENSMUST00000198952 126 ntBASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Gm21769-201ENSMUST00000211922 111 ntBASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3bQ9ES34 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gm11222-201ENSMUST00000119005 738 ntBASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gm13736-201ENSMUST00000119272 253 ntBASIC15.29■□□□□ 0.04
Ube3bQ9ES34 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.29■□□□□ 0.04
Ube3bQ9ES34 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms