Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm26464-201ENSMUST00000157094 305 ntBASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm5354-201ENSMUST00000182417 973 ntBASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm6218-201ENSMUST00000219812 628 ntBASIC12.74□□□□□ -0.37
Lima1Q9ERG0 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lima1Q9ERG0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Gm15376-201ENSMUST00000122258 783 ntBASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lima1Q9ERG0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lima1Q9ERG0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms