Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rrp8Q9DB85 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Gm12058-201ENSMUST00000118614 437 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Mir5120-201ENSMUST00000175020 78 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Gm19931-201ENSMUST00000198920 368 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rrp8Q9DB85 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rrp8Q9DB85 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms