Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.06■□□□□ 0
Ccdc7Q9D541 Gm10012-201ENSMUST00000078252 192 ntBASIC15.06■□□□□ 0
Ccdc7Q9D541 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc7Q9D541 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc7Q9D541 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.06■□□□□ 0
Ccdc7Q9D541 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc7Q9D541 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc7Q9D541 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc7Q9D541 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc7Q9D541 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc7Q9D541 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC15.06■□□□□ 0
Ccdc7Q9D541 Gm18263-201ENSMUST00000220846 1928 ntBASIC15.05■□□□□ 0
Ccdc7Q9D541 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.05■□□□□ 0
Ccdc7Q9D541 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc7Q9D541 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ccdc7Q9D541 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc7Q9D541 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc7Q9D541 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc7Q9D541 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc7Q9D541 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc7Q9D541 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.05■□□□□ 0
Ccdc7Q9D541 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc7Q9D541 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Ccdc7Q9D541 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ccdc7Q9D541 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Ccdc7Q9D541 Gm16479-201ENSMUST00000121706 932 ntBASIC15.05■□□□□ -0
Ccdc7Q9D541 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ccdc7Q9D541 Gm9630-201ENSMUST00000178304 885 ntBASIC15.05■□□□□ -0
Ccdc7Q9D541 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.05■□□□□ -0
Ccdc7Q9D541 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc7Q9D541 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC15.05■□□□□ -0
Ccdc7Q9D541 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Ccdc7Q9D541 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Ccdc7Q9D541 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc7Q9D541 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc7Q9D541 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc7Q9D541 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Nupl1-206ENSMUST00000225111 2936 ntBASIC15.04■□□□□ -0
Ccdc7Q9D541 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc7Q9D541 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.04■□□□□ -0
Ccdc7Q9D541 Gm37042-201ENSMUST00000193816 581 ntBASIC15.04■□□□□ -0
Ccdc7Q9D541 Gm37497-201ENSMUST00000195830 798 ntBASIC15.04■□□□□ -0
Ccdc7Q9D541 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Gm6180-201ENSMUST00000065243 498 ntBASIC15.04■□□□□ -0
Ccdc7Q9D541 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ccdc7Q9D541 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc7Q9D541 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc7Q9D541 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.04■□□□□ -0
Ccdc7Q9D541 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.04■□□□□ -0
Ccdc7Q9D541 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc7Q9D541 Gm36970-201ENSMUST00000193688 1859 ntBASIC15.03■□□□□ -0
Ccdc7Q9D541 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc7Q9D541 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Ccdc7Q9D541 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc7Q9D541 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.03■□□□□ -0
Ccdc7Q9D541 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc7Q9D541 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc7Q9D541 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ccdc7Q9D541 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.03■□□□□ -0
Ccdc7Q9D541 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc7Q9D541 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.03■□□□□ -0
Ccdc7Q9D541 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.03■□□□□ -0
Ccdc7Q9D541 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.03■□□□□ -0
Ccdc7Q9D541 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.03■□□□□ -0
Ccdc7Q9D541 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc7Q9D541 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.03■□□□□ -0
Ccdc7Q9D541 Gm45384-201ENSMUST00000210451 277 ntBASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms