Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chd1lQ9CXF7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Map1b-203ENSMUST00000223725 2669 ntBASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Gm43727-201ENSMUST00000198021 2647 ntBASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chd1lQ9CXF7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Gm15376-201ENSMUST00000122258 783 ntBASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Chd1lQ9CXF7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Chd1lQ9CXF7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Chd1lQ9CXF7 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms