Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.03□□□□□ -0.32
Lsm7Q9CQQ8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm7Q9CQQ8 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Snord83b-201ENSMUST00000104546 94 ntBASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Gm12291-201ENSMUST00000121627 311 ntBASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm7Q9CQQ8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Gm14921-201ENSMUST00000118643 908 ntBASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Mir8109-201ENSMUST00000184375 117 ntBASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Gm38158-201ENSMUST00000194617 339 ntBASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm7Q9CQQ8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms