Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Gm8598-201ENSMUST00000221184 836 ntBASIC14.7□□□□□ -0.06
Trim11Q99PQ2 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Gm8213-201ENSMUST00000118191 441 ntBASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Gm45384-201ENSMUST00000210451 277 ntBASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Gm9908-201ENSMUST00000211534 448 ntBASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim11Q99PQ2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Gm12291-201ENSMUST00000121627 311 ntBASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Proscos-202ENSMUST00000178990 666 ntBASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.68□□□□□ -0.06
Trim11Q99PQ2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim11Q99PQ2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.67□□□□□ -0.06
Trim11Q99PQ2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim11Q99PQ2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trim11Q99PQ2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim11Q99PQ2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim11Q99PQ2 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim11Q99PQ2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms